Insertion junction: CLIP2.072499_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072499
Chromosome:chromosome 3
Location:4008905
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGTGTGCATGTGCGCCTGGCTGTCGGTCTACAGGCCCCTCTCACCC
Internal bar code:CCGATGTCCTTTTCGTTTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:65
LEAP-Seq percent confirming:3.84615
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCACCTGACTGGACATG
Suggested primer 2:AAGAGCGAGGATGAGAGGGT