Insertion junction: CLIP2.072500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072500
Chromosome:chromosome 3
Location:1181632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149400 RWP11 (1 of 1) IPR003035//IPR011989//IPR016181 - RWP-RK domain // Armadillo-like helical // Acyl-CoA N-acyltransferase; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGGGTGGAGGCTGCTGCTGCGCGTGTGCCGAGGATGTGAGACTGCTG
Internal bar code:ACGTGGCGAAACTAATGCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCTTGCTAGGGAAAAT
Suggested primer 2:TAAGAGCCTGGCATTTGGGG