Insertion junction: CLIP2.072504_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072504
Chromosome:chromosome 2
Location:5373383
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g113600 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCAGTACCTCCGATGCGGACGGTTGAGCCATATGCGGTTTCCCATGGC
Internal bar code:TAGGAGTCAGAGACAACTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGACTATCGTACGTGCCC
Suggested primer 2:GGCTTCATGAGGGACTGCAT