Insertion junction: CLIP2.072506_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072506
Chromosome:chromosome 16
Location:7953709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690879 FAP173 (1 of 1) PTHR10264//PTHR10264:SF84 - BAND 7 PROTEIN-RELATED // HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2; Flagellar Associated Protein 173 3'UTR
Cre16.g690991 weak Similarity to Elongation factor 1 | gamma chain; (1 of 1) K03233 - elongation factor 1-gamma (EEF1G) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTACTACCTGCTGTGTCAAAGGTTGCAGCAGATCCGAATTGTGGAAG
Internal bar code:ATTTTGTCTTAGGTTGGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCATGATCGGGGTTGC
Suggested primer 2:CCACAGGGTTCACGCATAGT