Insertion junction: CLIP2.072506_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072506
Chromosome:chromosome 16
Location:7953715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690879 FAP173 (1 of 1) PTHR10264//PTHR10264:SF84 - BAND 7 PROTEIN-RELATED // HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2; Flagellar Associated Protein 173 3'UTR
Cre16.g690991 weak Similarity to Elongation factor 1 | gamma chain; (1 of 1) K03233 - elongation factor 1-gamma (EEF1G) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGTTTGCAGGCAGTGCGGCGGCAAGTATTATATGTGCAGGATGAAACA
Internal bar code:GTGCATCCTGGCTTGTGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGGGTTCACGCATAGT
Suggested primer 2:GAATGCATGATCGGGGTTGC