Insertion junction: CLIP2.072508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072508
Chromosome:chromosome 2
Location:6867101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388541 (1 of 11) IPR023296 - Glycosyl hydrolase, five-bladed beta-propellor domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTAGGCGAGGTGGCGACTCAACTTAGGCGGAATGACTTGGCAGTATAC
Internal bar code:GTCTCTTCACTACGCAGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2303
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGGCCTTGTTGAACGC
Suggested primer 2:CAGGTAGATGTGGCAGCACA