Insertion junction: CLIP2.072511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072511
Chromosome:chromosome 7
Location:5215369
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g349100 HEL39 ATP-dependent RNA helicase; (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAATGAATCAAGCCGCCTCCACCCTGGGTTGGGTTCGGTTTAATTT
Internal bar code:TATATCGTGACGACTATAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:52
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGCTCCAGCCACCAAAC
Suggested primer 2:CGTCCTTATGTCTCCTGCCC