Insertion junction: CLIP2.072515_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072515
Chromosome:chromosome 1
Location:848136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004750 (1 of 3) IPR000104//IPR002048 - Antifreeze protein, type I // EF-hand domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGCCCTGTTATGCGAGCGCGTGCGTGAAGGCGAACGTCAATTGGGGG
Internal bar code:TCTTTATAGGCGGATGTGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:128
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCTGACATCATAGCGT
Suggested primer 2:GTAGGAGCAGGCTCGTGTTT