Insertion junction: CLIP2.072525_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072525
Chromosome:chromosome 1
Location:7855449
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g055412 5'UTR
Cre01.g055416 (1 of 1) K12859 - U5 snRNP protein, DIM1 family (TXNL4A, DIB1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCCAGGAGTGGAGACTGAAGCTCTGCAATCACTCAATCAGCTGTCC
Internal bar code:GATCCTAACCGAGGATACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:459
LEAP-Seq percent confirming:70.2703
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCAATATCCCGCTAGTT
Suggested primer 2:GGATTCAGGGAGATCGCAGG