Insertion junction: CLIP2.072534_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072534
Chromosome:chromosome 12
Location:9497530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801494 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTAACTCTCAGCACAAAACTACTGGCCATTATCACAGTGCAGCGTAT
Internal bar code:AGATGTAGTTTGTTCTTTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATGTATGTGTGCGCGGT
Suggested primer 2:GACACTATCAGGCCTACCGC