Insertion junction: CLIP2.072535_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072535
Chromosome:chromosome 3
Location:2461044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTACAATCGTATAAGGCTAGTCCATTATACGCTCTTAGCGGTTTTCAT
Internal bar code:TTCAGTGGAACGTCCTCATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGACCAGCACGTTCTTC
Suggested primer 2:TGGGCTTTTGGGTCACAACT