Insertion junction: CLIP2.072539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072539
Chromosome:chromosome 1
Location:8155176
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g068377 (1 of 1) K14771 - U3 small nucleolar RNA-associated protein 19 (NOC4, UTP19) 3'UTR
Cre01.g068742 (1 of 4) PF01424 - R3H domain (R3H) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATAGCGAACAAGCCCGAGCGACCGGATGAGGGCCCACAGAGCGACCG
Internal bar code:CCAATAGTATCCTTTTTTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2597
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGGACACGTGTAACCGG
Suggested primer 2:CCGTAGTATTGACCGACCCG