Insertion junction: CLIP2.072542_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072542
Chromosome:chromosome 3
Location:767873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146087 (1 of 3) 1.14.11.33 - DNA oxidative demethylase / Alkylated DNA repair protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGGAACTGTTGGAGGCTGGCTGGTTCGGAAGTCCGGGACTTATGTGA
Internal bar code:TAAGGGACTGTTGGTCTTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2328
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGACTAACCTCCCCGCT
Suggested primer 2:GTCGCTGGTGTTCAAGGAGA