Insertion junction: CLIP2.072549_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072549
Chromosome:chromosome 17
Location:1597446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707400 (1 of 1) PF00013//PF13014 - KH domain (KH_1) // KH domain (KH_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAGAAAGACAGAACACCTCAGACCTCTTCGGCCAGCAGTTATTGCT
Internal bar code:ATATGGTCCGGAACGGTGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3388
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTCATCGAGAGGAGTCG
Suggested primer 2:TTTGGCTGCGCTCTGTTTTC