Insertion junction: CLIP2.072551_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072551
Chromosome:chromosome 6
Location:3233644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276900 HTB24,HTB1 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAAACACCGAGTTTGTTGTAAGAGTGGAAGACACGGTCCAGCCTCT
Internal bar code:AAGGGACTATCGGTGGCATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4817
LEAP-Seq percent confirming:85.8974
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGTCAAACAACCGCTC
Suggested primer 2:CCACCTACCTACGTCCTCCA