Insertion junction: CLIP2.072563_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072563
Chromosome:chromosome 7
Location:603808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316725 (1 of 3) PF01936 - NYN domain (NYN) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATTGCTATTCCCTATTGTAGAAAAATAGGCGGCAGGGAAAACTCGGC
Internal bar code:CCGTCAAGCAGGATTGCGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6685
LEAP-Seq percent confirming:3.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCTAATTGCTGCGAGCG
Suggested primer 2:GTTCCCTATGGGCTGACACC