Insertion junction: CLIP2.072563_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072563
Chromosome:chromosome 7
Location:603809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316725 (1 of 3) PF01936 - NYN domain (NYN) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATACGTGGCGCTCGCGGTTTGCACCAGTTTGGCACTTTTTGTCAACG
Internal bar code:CGTCGCAAGCGGCCAGGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4018
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCCTATGGGCTGACACC
Suggested primer 2:GAACCTAATTGCTGCGAGCG