Insertion junction: CLIP2.072566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072566
Chromosome:chromosome 1
Location:3685150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGTGCAGTCTTTGCTGGCGAGCGTAGCGTGGCACGGTTGCTGCAAC
Internal bar code:GTTTTCAAAGCGGAGGTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2048
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTGAGGTGGGTATGGGG
Suggested primer 2:CACAACACAATGCGCTCACA