Insertion junction: CLIP2.072566_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072566
Chromosome:chromosome 1
Location:3685159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTACCGTGGCGTGGGCAACGCGGAGGGCACCTGGCTGGAGCTGCTGT
Internal bar code:GTTTGGTGGCGGGACTGGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:897
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACACAATGCGCTCACA
Suggested primer 2:GGTTTGAGGTGGGTATGGGG