Insertion junction: CLIP2.072573_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072573
Chromosome:chromosome 1
Location:1311737
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g006800 GPI1,PIGA1,SETH2,GTR18 Phosphatidylinositol N-acetylglucosaminyltransferase, catalytic subunit; (1 of 1) K03857 - phosphatidylinositol glycan, class A (PIGA, GPI3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCACCCTACCTCACTCTCATGCGGCCAACCGCACAGGTGCTGAAGG
Internal bar code:TGTACGGACGTCTGGTGAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAACGTGTGCTCGCAAAA
Suggested primer 2:TGGTGTTTACGGACCACTCG