Insertion junction: CLIP2.072585_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072585
Chromosome:chromosome 13
Location:415525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564766 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTAGAAGGCTAGTTGATTTTAGCGGGCTCCTTTCTCCTCTCTAGCAAA
Internal bar code:GGTAGGGGCAATTCGAGGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:60.6061
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGACGTTGTGTGAAAAT
Suggested primer 2:ACTACCTGCATTGGAAGGCC