Insertion junction: CLIP2.072586_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072586
Chromosome:chromosome 12
Location:3096684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801388 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACAAGCGTGTGACCATTAGCACAGGTCGAAAACCCCACACTAAGT
Internal bar code:ATTCTGAGTGATTTTACCCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCGCATTGCTGTGTTAG
Suggested primer 2:GCTGAGCCCACTCCTTCTTT