Insertion junction: CLIP2.072589_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072589
Chromosome:chromosome 1
Location:4408529
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g030050 PRPL34 Chloroplast ribosomal protein L34; (1 of 1) K02914 - large subunit ribosomal protein L34 (RP-L34, MRPL34, rpmH) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATTGTGTGTAGCAAACGTTAAGCACTATGAATGAAAGAGGTTGAAG
Internal bar code:TTAGTACGCCGCGGTATTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATGCCACATGAATGAT
Suggested primer 2:TGTGGGCAGTACAAGCGTAG