Insertion junction: CLIP2.072591_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072591
Chromosome:chromosome 9
Location:4541877
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g401145 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCCTCCCCCTCACCTCTAACTTGATGTCGCATGCGGCCACGCCCAGG
Internal bar code:TTCAACGACTGAGTGAAACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTCAACACCACCAGTCG
Suggested primer 2:TGAACATGATGTGCCCCGAA