Insertion junction: CLIP2.072594_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072594
Chromosome:chromosome 12
Location:2010473
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTCTGCTGCCGTACGTGCCCCCGTGGACCCGGGTCGCGGCGGCGTG
Internal bar code:GCCCCGGTGCCTATGGTGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5500
LEAP-Seq percent confirming:9.83607
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACACAGCAGTCACAT
Suggested primer 2:TCTTTTCTGCTCGCGTGTCT