Insertion junction: CLIP2.072597_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072597
Chromosome:chromosome 6
Location:1642838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261950 ANK11 (1 of 29) PF13637 - Ankyrin repeats (many copies) (Ank_4); Predicted protein with ankyrin repeats 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCCTCGACAGCTGGAAGACTGCTGGGGGCTGGACGCGGAAGGTTGT
Internal bar code:TGGGTGAAACAAAGGTCAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:43.2432
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGCATACCTGAAAGCA
Suggested primer 2:CTACGTCCCGATGTACTGGC