Insertion junction: CLIP2.072612_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072612
Chromosome:chromosome 2
Location:7306782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391467 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGTTGATGCACAGCCACCCCGAACTCGCACAACATAATCACGTCGCT
Internal bar code:TTTCTAGGGAGCCACAGCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2886
LEAP-Seq percent confirming:78.8889
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCACCACGACTACTTC
Suggested primer 2:ATGATGGTGGTGGTGAGCAG