Insertion junction: CLIP2.072616_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072616
Chromosome:chromosome 16
Location:7375030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679893 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGAAATATCGGAAGGGTGAACAGGCGGTCTTGCGCGCTCCGAGCCTG
Internal bar code:TCCAATTAAATGAAGAATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4451
LEAP-Seq percent confirming:86.1538
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGAGCACCCACATTCCG
Suggested primer 2:TCCTCAGGTCCGACTGATGT