Insertion junction: CLIP2.072617_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072617
Chromosome:chromosome 12
Location:2608892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506350 HFO18 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR
Cre12.g506400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAGACTCCCACCGCCTCGGGCCCTCCCCGCGTACACGCGCATAGCAG
Internal bar code:GGAAAGATGGGGGGCGGGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3632
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTTTTGGACTGGGTGT
Suggested primer 2:AAATCGTGGGCGGTTGTTTG