Insertion junction: CLIP2.072617_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072617
Chromosome:chromosome 12
Location:2608894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506350 HFO18 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR
Cre12.g506400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCGCCCCTCCACCCTCCACTGTAAGTGCATGTCAACACCCAACCCG
Internal bar code:GTACTTTGGGTCGGGTAGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2186
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCGTGGGCGGTTGTTTG
Suggested primer 2:CTGGGTTTTGGACTGGGTGT