Insertion junction: CLIP2.072618_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072618
Chromosome:chromosome 17
Location:360511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698365 PF7,CCDC40,FAP172 Flagellar Associated Protein 172 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCGATAGGCTTCTTACCGGAGACTTGACCCCTGCTGCTTGACATCC
Internal bar code:AGAAGGTATCCAACGAGCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCATACAGCTCCACACC
Suggested primer 2:GTCAGTGCACTTGACGCAAG