Insertion junction: CLIP2.072618_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072618
Chromosome:chromosome 17
Location:360523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698365 PF7,CCDC40,FAP172 Flagellar Associated Protein 172 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTTGGTTCAATTTGTGCTTCTTAAGTCCAATCAAAATTTCCGTGTAC
Internal bar code:ACTTTATTTATACAATGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4087
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGTGCACTTGACGCAAG
Suggested primer 2:AAGCCATACAGCTCCACACC