Insertion junction: CLIP2.072628_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072628
Chromosome:chromosome 16
Location:2013272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656800 (1 of 2) PTHR12210//PTHR12210:SF70 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // AT02326P-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGTGTCTGCTATCTAATCCAGGCTGGCTACGCCTCGACTGGTGCCAT
Internal bar code:TACTTTACAGTGACTCTCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCAGCCAAGGAAGGTGC
Suggested primer 2:TGATGCCTGCATGTTTGTGC