Insertion junction: CLIP2.072632_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072632
Chromosome:chromosome 10
Location:896114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801110 (1 of 39) IPR001190 - SRCR domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAATACCTGCAACGAGACTAACCGAGCCGCAAGGGCCCCTCGTCTCCTG
Internal bar code:AAGGGCATACTACGGGCTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3406
LEAP-Seq percent confirming:93.6508
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACATGTACGGAGGGGCT
Suggested primer 2:CAAAGCGCCGAGGATTCATG