Insertion junction: CLIP2.072637_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072637
Chromosome:chromosome 8
Location:2465109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACTAGTCCTTCCTCTCGCGCCGCGAGTCCTTTCCTTCGTCGCCGCTC
Internal bar code:ACGTGGCTCTGGCTCACGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3138
LEAP-Seq percent confirming:87.2549
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATTGCTGGCACTGGCAA
Suggested primer 2:GACGAGCTAAGGATCAGCCC