Insertion junction: CLIP2.072640_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072640
Chromosome:chromosome 3
Location:7712127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203650 (1 of 1) IPR009072//IPR013785 - Histone-fold // Aldolase-type TIM barrel 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAATTGTTTTAGTAGCCTGGGTTTAGAGAGGGACTGCAACTTGCCAA
Internal bar code:ATGCTTACCGGTTAGTATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1716
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCAGCGCCCATACATAT
Suggested primer 2:CGTCGATGGGGATCAGACTG