Insertion junction: CLIP2.072661_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072661
Chromosome:chromosome 3
Location:1160548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149201 (1 of 1) PTHR10641//PTHR10641:SF655 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATGGATAGGTACAGCCGCACAAAGTGCAGTGCTGAAGTGCTGCGCGG
Internal bar code:GTGGGGCGTCTTAACCCCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1599
LEAP-Seq percent confirming:43.662
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGAAGTACGGAAAGTGT
Suggested primer 2:CGGGTGGCGTAAGAGGATAC