Insertion cassette: | CIB2 |
Side of cassette: | 3' truncated? |
Strand: | + |
Strain: | CLIP2.072665 |
Chromosome: | chromosome 5 |
Location: | 2778284 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre05.g240850 | THIC1,THIC,THI8 | (1 of 1) 4.1.99.17 - Phosphomethylpyrimidine synthase; Hydroxymethylpyrimidine phosphate synthase | 3'UTR |
Cre05.g240900 | (1 of 1) IPR000001//IPR024079 - Kringle // Metallopeptidase, catalytic domain | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CTGTAAGACCCAGACCATGGTTGCATGGCCATCCTCCCCCCTGAGTCAGG |
Internal bar code: | TCACGGCAGACATGCGTGTGAG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1303 |
LEAP-Seq percent confirming: | 95.4545 |
LEAP-Seq n confirming: | 21 |
LEAP-Seq n nonconfirming: | 1 |
LEAP-Seq n unique pos: | 22 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | TCTGGGGCAATGGGGATAGA |
Suggested primer 2: | CATCAAACGCAAGCACCACA |