Insertion junction: CLIP2.072667_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072667
Chromosome:chromosome 16
Location:1137524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649950 HFO24,HFO40 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACTACAGTCAGGAGCCCAACAGCTCCCAACGAGGCTTCACTCCCAGA
Internal bar code:CCGTTACACTTGTTGTGTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:2.38095
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGAACGTCTTCAGCAC
Suggested primer 2:TACCAGCTACCCCCTAACCC