Insertion junction: CLIP2.072672_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072672
Chromosome:chromosome 4
Location:781413
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g217967 (1 of 1) IPR008906//IPR012337 - HAT dimerisation domain, C-terminal // Ribonuclease H-like domain CDS
Cre04.g800447 (1 of 1) PTHR32166:SF33 - HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGCTAGTCGAGTCGTGGTCCCAGAATAATAATAATAATAATCCCAA
Internal bar code:CGGATAGGATGGGGTGTCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGACCCGAGTTCGATCCT
Suggested primer 2:GTGTTGTGCACGAGACCAAC