Insertion junction: CLIP2.072678_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072678
Chromosome:chromosome 13
Location:1445386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572100 5'UTR
Cre13.g572150 NAT29 N-acetyltransferase; (1 of 1) PTHR14744:SF15 - N-ALPHA-ACETYLTRANSFERASE 60 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCTTTATATCGGCGCTGCGCAAAGTAAAGGGTGTTTTCTGCACTAGG
Internal bar code:ATGCGTGCTGGGGCCGATTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1028
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCGGGTTCCTTGAAACC
Suggested primer 2:TCAACGGAAGCAGCTACAGG