Insertion junction: CLIP2.072680_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072680
Chromosome:chromosome 12
Location:9262230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542600 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGAAATGATAAGGCGGTCGACGTGGAGAGGAGGACGAGGGCTGCAGC
Internal bar code:GAGATCGTCGTTACGTGCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1828
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAGGCTGAGAAGCTGTG
Suggested primer 2:CCGTAAGTCGAGGCCAAACT