Insertion junction: CLIP2.072680_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072680
Chromosome:chromosome 12
Location:9262243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542600 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGGTCAACGATTCAGCACGTGGCTCGACAAACCCCCGCAGCCGCTC
Internal bar code:GATGGCGCCAGATGGTCATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2634
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAAGTCGAGGCCAAACT
Suggested primer 2:TGTGAGGCTGAGAAGCTGTG