Insertion junction: CLIP2.072681_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072681
Chromosome:chromosome 6
Location:3067889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275000 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) 3'UTR
Cre06.g275050 GGH2 (1 of 2) 3.4.19.9 - Gamma-glutamyl hydrolase / Pteroyl-poly-alpha-glutamate hydrolase; Gamma-glutamyl hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAAATGTAATGGAGTGCGGCTCGGCAACCCCGGGACGTCACCTCCGC
Internal bar code:ATCACGGGGGCTAAAGCGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGTGTGTGTTTGTGAT
Suggested primer 2:CTTGCCGTTTGACTTGGTGG