Insertion junction: CLIP2.072682_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072682
Chromosome:chromosome 12
Location:9442887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541000 3'UTR
Cre12.g541050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTAAAAGCCGCCATGTGCTTGAGTAGCATATGCAGGCATGAGCGAAA
Internal bar code:GAAGGAGCATCAACGCGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3357
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGACCGCAACCCAGAAAA
Suggested primer 2:CCTTTGTGTTTGTGGCGAGG