Insertion junction: CLIP2.072684_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072684
Chromosome:chromosome 9
Location:5219762
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCCGTGGTGGAAAGGCTTGTTTGCAGCGGTGACTGTCTGAACCGGAG
Internal bar code:GTGTTATCTGTGTTCAGGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTAGCAGTGCAGGCAA
Suggested primer 2:CGAGGGCTCCATGATTTCGT