Insertion junction: CLIP2.072704_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072704
Chromosome:chromosome 13
Location:3798568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGCCACACGCGGCCTGGAAACCAGCTCTCCCTGCCCTTTCCGCCTG
Internal bar code:GTGAATCATCGATTCATTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:854
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAAGGAGTTTGGCGGCA
Suggested primer 2:TGCCATCCCCTTTCACTTCC