Insertion junction: CLIP2.072706_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072706
Chromosome:chromosome 6
Location:6420517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293516 DEGO2 (1 of 4) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC; Inactive Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGCAATATAGCAAGGAGGAGAGCGTGGCCGATGCTTGACAACGGAG
Internal bar code:CCCAACCTGGGGCATATTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCAACCACCCAAACTTG
Suggested primer 2:CGACACTTGCTCTCACTGGT