Insertion junction: CLIP2.072709_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072709
Chromosome:chromosome 3
Location:6557589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194400 EIF3I Eukaryotic translation initiation factor 3, subunit I; (1 of 1) K03246 - translation initiation factor 3 subunit I (EIF3I) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTGGGGTTATGATAGCGGTAGCAGACGTGTGTTCTGTTCACTATAT
Internal bar code:GTTGCCGCGGTAACTCATACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5325
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGTCGGACTGCGGTATC
Suggested primer 2:CTTTGTAACATCGCGGCTCG