Insertion junction: CLIP2.072713_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072713
Chromosome:chromosome 4
Location:4078551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g233302 (1 of 2) PTHR23132//PTHR23132:SF9 - D-ALANINE--D-ALANINE LIGASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACGAAGTGTATGGGGAAACCATCTAATCAGGATGTAAGTAAGTGTCG
Internal bar code:CGGTCCGTCTTTTGGGCGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACTTGCCCTGAACACG
Suggested primer 2:TACATCGTCTACCCTGGGCA